Download

Candida albicans

File NameDownload LinkDescription
Calb1.ctss Download

Raw TSS data obtained from Candida albicans grown in YPD medium replicate 1

Calb2.ctss Download

Raw TSS data obtained from Candida albicans grown in YPD medium replicate 2

CalbconsensusClusters.txt Download

Core promoter data obtained from Candida albicans grown in YPD medium

Genome
GCF_000182965.3_ASM18296v3_genomic.fna Download

Reference genome sequence for Candida albicans from NCBI

GCF_000182965.3_ASM18296v3_genomic.gff Download

Annotations for Candida albicans from NCBI

Nucleosome_Occupancy
Field_2009_PMID_19252487_Calb.bw Download

Nuclesome occupancy data for Candida albicans from Field_2009_PMID_19252487

Kluyveromyces lactis

File NameDownload LinkDescription
Klac1.ctss Download

Raw TSS data obtained from Kluyveromyces lactis grown in YPD medium replicate 1

Klac2.ctss Download

Raw TSS data obtained from Kluyveromyces lactis grown in YPD medium replicate 2

KlacconsensusClusters.txt Download

Core promoter data obtained from Kluyveromyces lactis grown in YPD medium

Genome
GCF_000002515.2_ASM251v1_genomic.fna Download

Reference genome sequence for Kluyveromyces lactis from NCBI

GCF_000002515.2_ASM251v1_genomic.gff Download

Annotations for Kluyveromyces lactis from NCBI

Lachancea kluyveri

File NameDownload LinkDescription
Lklu1.ctss Download

Raw TSS data obtained from Lachancea kluyveri grown in YPD medium replicate 1

Lklu2.ctss Download

Raw TSS data obtained from Lachancea kluyveri grown in YPD medium replicate 2

LkluconsensusClusters.txt Download

Core promoter data obtained from Lachancea kluyveri grown in YPD medium

Genome
Lkluyveri_annotations.gff Download

Reference genome sequence for Lachancea kluyveri from YGOB

Lkluyveri_sequence.fsa Download

Annotations for Lachancea kluyveri from YGOB

Lachancea waltii

File NameDownload LinkDescription
Lwal1.ctss Download

Raw TSS data obtained from Lachancea waltii grown in YPD medium replicate 1

Lwal2.ctss Download

Raw TSS data obtained from Lachancea waltii grown in YPD medium replicate 2

LwalconsensusClusters.txt Download

Core promoter data obtained from Lachancea waltii grown in YPD medium

Genome
Lwaltii_annotations.gff Download

Annotations for Lachancea waltii from YGOB

Lwaltii_sequence.fsa Download

Reference genome sequence for Lachancea waltii from YGOB

Naumovozyma castellii

File NameDownload LinkDescription
Ncas1.ctss Download

Raw TSS data obtained from Naumovozyma castellii grown in YPD medium replicate 1

Ncas2.ctss Download

Raw TSS data obtained from Naumovozyma castellii grown in YPD medium replicate 2

NcasconsensusClusters.txt Download

Core promoter data obtained from Naumovozyma castellii grown in YPD medium

Genome
GCF_000237345.1_ASM23734v1_genomic.gff Download

Annotations for Naumovozyma castellii from NCBI

Ncastellii_GCF_000237345.1_ASM23734v1_genomic.fna Download

Reference genome sequence for Naumovozyma castellii from NCBI

Saccharomyces bayanus

File NameDownload LinkDescription
Sbay1.ctss Download

Raw TSS data obtained from Saccharomyces bayanus grown in YPD medium replicate 1

Sbay2.ctss Download

Raw TSS data obtained from Saccharomyces bayanus grown in YPD medium replicate 2

SbayconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces bayanus grown in YPD medium

Genome
Sbay.Lu.gtf Download

Annotations for Saccharomyces bayanus

Sbayanus_GCA_000167035.1_ASM16703v1_genomic.fna Download

Reference genome sequence for Saccharomyces bayanus from NCBI

Saccharomyces cerevisiae

File NameDownload LinkDescription
ScerArrestconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae under cell division arrest

ScerDDconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae under DNA damage

ScerDSAconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae after Diauxia shift

ScerGalconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae with Galactose as carbon source

ScerGlcconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae under 16% glucose concentration

ScerH2O2consensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae under oxidative stress

ScerHSconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae after 30 heat shock replcate 1

ScerNaClconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae under osmotic stress

ScerYPDconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces cerevisiae in log phase under YPD medium

CTSS_bed
Consensus_cluster_bed
Genome
Saccharomyces_cerevisiae.R64-1-1.92.gff3 Download

Annotations for Saccharomyces cerevisiae from SGD

genome.fa Download

Reference genome sequence for Saccharomyces cerevisiae from SGD

ctss
ScerArrest.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under cell division arrest replicate 1

ScerArrest.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under cell division arrest replicate 2

ScerDD.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under DNA damage replicate 1

ScerDD.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under DNA damage replicate 2

ScerDSA.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae after Diauxia shift replicate 1

ScerDSA.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae after Diauxia shift replicate 2

ScerGal.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae with Galactose as carbon source replicate 1

ScerGal.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae with Galactose as carbon source replicate 2

ScerGlc.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under 16% glucose concentration replicate 1

ScerGlc.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under 16% glucose concentration replicate 2

ScerH2O2.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under oxidative stress replicate 1

ScerH2O2.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under oxidative stress replicate 2

ScerHS.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae after 30 heat shock replcate 1

ScerHS.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae after 30 heat shock replcate 2

ScerNaCl.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under osmotic stress replicate 1

ScerNaCl.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae under osmotic stress replicate 2

ScerYPD.1.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae in log phase under YPD medium replicate 1

ScerYPD.2.ctss Download

Raw TSS data obtained from Saccharomyces cerevisiae in log phase under YPD medium replicate 2

other_tracks
Doris_et_al_2018
GSM3189539_WT-37C-1_tss-seq-spikenorm.bw Download

TSS-seq of wild type after an 80 minute shift from 30C to 37C from Doris et al. 2018

GSM3189540_WT-37C-2_tss-seq-spikenorm.bw Download

TSS-seq of wild type after an 80 minute shift from 30C to 37C from Doris et al. 2018

GSM3189541_spt6-1004-37C-1_tss-seq-spikenorm.bw Download

TSS-seq of spt6-1004 mutant at 37C from Doris et al. 2018

GSM3189542_spt6-1004-37C-2_tss-seq-spikenorm.bw Download

TSS-seq of spt6-1004 mutant at 37C from Doris et al. 2018

GSM3189543_WT-37C-1_tfiib-chipnexus-libsizenorm-midpoints.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189543_WT-37C-1_tfiib-chipnexus-libsizenorm-protection.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189543_WT-37C-1_tfiib-chipnexus-libsizenorm.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189544_WT-37C-2_tfiib-chipnexus-libsizenorm-midpoints.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189544_WT-37C-2_tfiib-chipnexus-libsizenorm-protection.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189544_WT-37C-2_tfiib-chipnexus-libsizenorm.bw Download

TFIIB CHIP-nexus of wild type fom Doris et al. 2018

GSM3189545_spt6-1004-37C-1_tfiib-chipnexus-libsizenorm-midpoints.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189545_spt6-1004-37C-1_tfiib-chipnexus-libsizenorm-protection.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189545_spt6-1004-37C-1_tfiib-chipnexus-libsizenorm.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189546_spt6-1004-37C-2_tfiib-chipnexus-libsizenorm-midpoints.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189546_spt6-1004-37C-2_tfiib-chipnexus-libsizenorm-protection.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189546_spt6-1004-37C-2_tfiib-chipnexus-libsizenorm.bw Download

TFIIB CHIP-nexus of spt6-1004 mutant fom Doris et al. 2018

GSM3189547_WT-37C-1-netseq-libsizenorm-5end.bw Download

NET-seq of wild type from Doris et al. 2018

GSM3189548_WT-37C-2-netseq-libsizenorm-5end.bw Download

NET-seq of wild type from Doris et al. 2018

GSM3189549_spt6-1004-30C-1-netseq-libsizenorm-5end.bw Download

NET-seq of spt6-1004 mutant at 30C from Doris et al. 2018

GSM3189550_spt6-1004-30C-2-netseq-libsizenorm-5end.bw Download

NET-seq of spt6-1004 mutant at 30C from Doris et al. 2018

GSM3189551_spt6-1004-37C-1-netseq-libsizenorm-5end.bw Download

NET-seq of spt6-1004 mutant at 37C from Doris et al. 2018

GSM3189552_spt6-1004-37C-2-netseq-libsizenorm-5end.bw Download

NET-seq of spt6-1004 mutant at 37C from Doris et al. 2018

GSM3189553_YPD-1_rnapii-chipnexus-libsizenorm-midpoints.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189553_YPD-1_rnapii-chipnexus-libsizenorm-protection.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189553_YPD-1_rnapii-chipnexus-libsizenorm.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189554_YPD-2_rnapii-chipnexus-libsizenorm-midpoints.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189554_YPD-2_rnapii-chipnexus-libsizenorm-protection.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189554_YPD-2_rnapii-chipnexus-libsizenorm.bw Download

Spt6 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189555_YPD-1_spt6-chipnexus-libsizenorm-midpoints.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189555_YPD-1_spt6-chipnexus-libsizenorm-protection.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189555_YPD-1_spt6-chipnexus-libsizenorm.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189556_YPD-2_spt6-chipnexus-libsizenorm-midpoints.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189556_YPD-2_spt6-chipnexus-libsizenorm-protection.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189556_YPD-2_spt6-chipnexus-libsizenorm.bw Download

Rpb1 ChIP-nexus of wild type rom Doris et al. 2018

GSM3189557_WT-37C-1-mnase-midpoint-spikenorm.bw Download

MNase-seq of wild type from Doris et al. 2018

GSM3189557_WT-37C-1-mnase-midpoint_smoothed-spikenorm.bw Download

MNase-seq of wild type from Doris et al. 2018

GSM3189557_WT-37C-1-mnase-wholefrag-spikenorm.bw Download

MNase-seq of wild type from Doris et al. 2018

GSM3189558_spt6-1004-37C-1-mnase-midpoint-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

GSM3189558_spt6-1004-37C-1-mnase-midpoint_smoothed-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

GSM3189558_spt6-1004-37C-1-mnase-wholefrag-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

GSM3189559_spt6-1004-37C-2-mnase-midpoint-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

GSM3189559_spt6-1004-37C-2-mnase-midpoint_smoothed-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

GSM3189559_spt6-1004-37C-2-mnase-wholefrag-spikenorm.bw Download

MNase-seq of spt6-1004 mutant from Doris et al. 2018

H3-Methylation
Kirmizis_2007_Rap1_mutant_histone_H3R2A.merge.bw Download

Rap1 mutant methylation at histone H3R2A from Kirmizis 2017

Kirmizis_2007_Rap1_wildtype_histone_H3.merge.bw Download

Rap1 wildtype methylation at histone H3R2A from Kirmizis 2017

Kirmizis_2007_Sir2_mutant_histone_H3R2A.merge.bw Download

Sir2 mutant methylation at histone H3R2A from Kirmizis 2017

Kirmizis_2007_Sir2_wildtype_histone_H3.merge.bw Download

Sir2 wildtype methylation at histone H3R2A from Kirmizis 2017

Kirmizis_2007_histone_H3K4me1.merge.bw Download

Histone methylation at H3R2me1 from Kirmizis 2007

Kirmizis_2007_histone_H3K4me2.merge.bw Download

Histone methylation at H3R2me2 from Kirmizis 2007

Kirmizis_2007_histone_H3K4me3.merge.bw Download

Histone methylation at H3R2me3 from Kirmizis 2007

Kirmizis_2007_histone_H3R2me2a.merge.bw Download

Histone methylation at H3R2me2a from Kirmizis 2007

Nucleosome_Occupancy
Field_2009_PMID_19252487_GAL.bw Download

Nuclesome occupancy data obtained from Saccharomyces cerevisiae in YPGal condition from Field 2009

Field_2009_PMID_19252487_YPD.bw Download

Nuclesome occupancy data obtained from Saccharomyces cerevisiae in YPD condition from Field 2009

PWM-predicted_binding_site
Grant_2011_PMID_21330290.README Download

SGD_PWM_predicted_binding_sites_p0.00001.gff3 Download

PWM predicted binding site p0.00001 from Grant 2011

SGD_PWM_predicted_binding_sites_p0.0001.gff3 Download

PWM predicted binding site p0.0001 from Grant 2011

SGD_PWM_predicted_binding_sites_p0.001.gff3 Download

PWM predicted binding site p0.001 from Grant 2011

Prediction_of_DNA_structural_features
Zhou_2013_PMID_23703209.README Download

Zhou_2013_minor.bw Download

Prediction of DNA structural features-minor from Zhou 2013

Zhou_2013_propel.bw Download

Prediction of DNA structural features-propel from Zhou 2013

Zhou_2013_roll.bw Download

Prediction of DNA structural features-roll from Zhou 2013

Zhou_2013_twist.bw Download

Prediction of DNA structural features-twist from Zhou 2013

TATA_elements
Rhee_2012_PMID_22258509.README Download

Rhee_2012_TATA_elements_V64.gff3 Download

TATA elements from Rhee 2012

TFBS_using_ChIP-chip
Venters_2011_PMID_21329885.README Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V53toV64_FDR5_gff3_unmapped_files.tgz Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V53toV64_gff3_unmapped_files.tgz Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V64_FDR5_gff3_files.tgz Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V64_FDR_gff3_files.tgz Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V64_gff3_files.tgz Download

Transcription factor binding sites from Venters 2011

Venters_2011_PMID_21329885_V64_FDR5_gff3_files
Venters_2011_25.gff3 Download

Transcription factor binding sites from Venters 2011

Venters_2011_37.gff3 Download

Transcription factor binding sites from Venters 2011

TL-seq_and_TATL-seq_study_of_5UTRs
Arribere_2013_GSE39074_TATL-SeqCombined.bw Download

TSS data from Arribere 2013

Arribere_2013_GSM955198_TL-SeqPlusTAP.bw Download

TSS data from Arribere 2013

Arribere_2013_GSM955199_TL-SeqMinusTAP.bw Download

TSS data from Arribere 2013

Arribere_2013_PMID_23580730.README Download

TSS
Malabat_2015_YPD.bw Download

TSS data obtained in YPD condition from Malabat 2015

Pelechano_2013 _Galactose.bw Download

TSS data obtained in YPGal condition from Pelechano 2013

Pelechano_2013 _YPD.bw Download

TSS data obtained in YPD condition from Pelechano 2013

TSS-seq
TSS-sequencing.CTSS.bw Download

TSS data from TSS sequencing

Transcriptional_regulator_mapping
MacIsaac_2006_ChIP_chip_TFBSs_V52toV64_unmapped.txt Download

Transcriptional regulator mapping by CHIP-seq from Maclsaac 2006

MacIsaac_2006_ChIP_chip_TFBSs_V64.gff3 Download

Transcriptional regulator mapping by CHIP-seq from Maclsaac 2006

MacIsaac_2006_PMID_16522208.README Download

Waern_2013_RNA_seq
Waern_2013_AlphaFactor.gff3 Download

RNA-seq data obtained under YPD condition with Alpha factor from Waern 2013

Waern_2013_Benomyl.gff3 Download

RNA-seq data obtained under Benomyl condition from Waern 2013

Waern_2013_Calcofluor.gff3 Download

RNA-seq data obtained under Calcofluor condition from Waern 2013

Waern_2013_CongoRed.gff3 Download

RNA-seq data obtained under Congo Red condition from Waern 2013

Waern_2013_DNADamage.gff3 Download

RNA-seq data obtained under DNA Damage condition from Waern 2013

Waern_2013_GrapeJuice.gff3 Download

RNA-seq data obtained under Grape Juice condition from Waern 2013

Waern_2013_HeatShock.gff3 Download

RNA-seq data obtained under Heat Shock condition from Waern 2013

Waern_2013_HighCalcium.gff3 Download

RNA-seq data obtained under High Calcium condition from Waern 2013

Waern_2013_Hydroxyurea.gff3 Download

RNA-seq data obtained under Hydroxyurea condition from Waern 2013

Waern_2013_LowNitrogen.gff3 Download

RNA-seq data obtained under Low Nitrogen condition from Waern 2013

Waern_2013_LowPhosphate.gff3 Download

RNA-seq data obtained under Low Phosphatee condition from Waern 2013

Waern_2013_OxidativeStress.gff3 Download

RNA-seq data obtained under Oxidative Stress condition from Waern 2013

Waern_2013_PMID_23390610.README Download

Waern_2013_Salt.gff3 Download

RNA-seq data obtained under Salt condition from Waern 2013

Waern_2013_ScGlycerolMedia.gff3 Download

RNA-seq data obtained under ScGlycerol Media from Waern 2013

Waern_2013_ScMedia.gff3 Download

RNA-seq data obtained under Sc Media from Waern 2013

Waern_2013_Sorbitol.gff3 Download

RNA-seq data obtained under Sorbitol condition from Waern 2013

Waern_2013_StationaryPhase.gff3 Download

RNA-seq data obtained in Stationary Phase from Waern 2013

location_of_TFIIS_RNA_Pol_II_and_III
Ghavi-Helm_2008_Dst1_RNA_PolIII_SC-L_16C_ChIP_chip_V64.bw Download

Dst1 mutant RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_Dst1_RNA_PolII_SC-L_16C_ChIP_chip_V64.bw Download

Dst1 mutant RNA PolII data from Ghavi-Helm 2008

Ghavi-Helm_2008_PMID_18628399.README Download

Ghavi-Helm_2008_WT_RNA_PolIII_YPD_16C_ChIP_chip_V64.bw Download

Wildtype RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_RNA_PolIII_YPD_30C_ChIP_chip_V64.bw Download

Wildtype RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_RNA_PolII_YPD_16C_ChIP_chip_V64.bw Download

Wildtype RNA PolII data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_RNA_PolII_YPD_30C_ChIP_chip_V64.bw Download

Wildtype RNA PolII data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_TFIIS_SDMPA_30C_ChIP_chip_V64.bw Download

Wildtype TFIIS data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_TFIIS_SD_30C_ChIP_chip_V64.bw Download

Wildtype TFIIS data from Ghavi-Helm 2008

Ghavi-Helm_2008_WT_TFIIS_YPD_30C_ChIP_chip_V64.bw Download

Wildtype TFIIS data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1D_RNA_PolIII_YPD_16C_ChIP_chip_V64.bw Download

dst1D mutant RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1D_RNA_PolII_YPD_16C_ChIP_chip_V64.bw Download

dst1D mutant RNA PolII data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1_E291A_RNA_PolIII_SC-L_16C_ChIP_chip_V64.bw Download

dst1 mutant RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1_E291A_RNA_PolII_SC-L_16C_ChIP_chip_V64.bw Download

dst1 mutant RNA PolII data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1_R200A_RNA_PolIII_SD-L_16C_ChIP_chip_V64.bw Download

dst1 mutant RNA PolIII data from Ghavi-Helm 2008

Ghavi-Helm_2008_dst1_R200A_RNA_PolII_SC-L_16C_ChIP_chip_V64.bw Download

dst1 mutant RNA PolII data from Ghavi-Helm 2008

methylated_and_acetylated_histones
Pokholok_2005_Esa1_vs_WCE_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_Gcn4_vs_WCE_AA_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_Gcn5_vs_WCE_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_IgG_control_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_PMID_16122420.README.txt Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K14ac_vs_H3_H2O2_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K14ac_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K14ac_vs_WCE_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K36me3_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K4me1_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K4me2_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K4me3_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3K9ac_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3_vs_WCE_H2O2_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H3_vs_WCE_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H4_vs_WCE_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H4ac_vs_H3_H2O2_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_histone_H4ac_vs_H3_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_2005_no_antibody_control_YPD_ChIP_chip_V64.bw Download

Histone modification data fro Pokholok 2005

Pokholok_et_al_data.sacCer3.xlsx Download

Histone modification data fro Pokholok 2005

nucleosome_organization
Mavrich_2008_PMID_18550805.README Download

Mavrich_2008_PMID_18550805_V64_track_files.zip Download

Nucleosome organization data from Mavrich 2008

Mavrich_2008_PMID_18550805_V64_track_files
Mavrich_2008_H3H4_nucleosome_positions_V56toV64_unmapped.txt Download

Nucleosome organization data from Mavrich 2008

Mavrich_2008_H3H4_nucleosome_positions_V64.gff3 Download

Nucleosome organization data from Mavrich 2008

Mavrich_2008_H3H4_nucleosome_positions_WC_V56toV64_unmapped.txt Download

Nucleosome organization data from Mavrich 2008

Mavrich_2008_H3H4_nucleosome_positions_WC_V64.gff3 Download

Nucleosome organization data from Mavrich 2008

pre-initiaton complexes
Rhee_2012_PMID_22258509.README Download

Saccharomyces mikatae

File NameDownload LinkDescription
Smik1.ctss Download

Raw TSS data obtained from Saccharomyces mikatae grown in YPD medium replicate 1

Smik2.ctss Download

Raw TSS data obtained from Saccharomyces mikatae grown in YPD medium replicate 2

SmikconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces mikatae grown in YPD medium

Genome
Smikatae_annotations.gff Download

Annotations for Saccharomyces mikatae from YGOB

Smikatae_sequence.fsa Download

Reference genome sequence for Saccharomyces mikatae from YGOB

Saccharomyces paradoxus

File NameDownload LinkDescription
Spar1.ctss Download

Raw TSS data obtained from Saccharomyces paradoxus grown in YPD medium replicate 1

Spar2.ctss Download

Raw TSS data obtained from Saccharomyces paradoxus grown in YPD medium replicate 2

SparconsensusClusters.txt Download

Core promoter data obtained from Saccharomyces paradoxus grown in YPD medium

Genome
Spar_CBS432.genome.fa Download

Reference genome sequence for Saccharomyces paradoxus from NCBI

Spar_chr.gff Download

Annotations for Saccharomyces paradoxus from NCBI

Schizosaccharomyces japonicus

File NameDownload LinkDescription
Sjap1.ctss Download

Raw TSS data obtained from Schizosaccharomyces japonicus grown in YPD medium replicate 1

Sjap2.ctss Download

Raw TSS data obtained from Schizosaccharomyces japonicus grown in YPD medium replicate 2

SjapconsensusClusters.txt Download

Core promoter data obtained from Schizosaccharomyces japonicus grown in YPD medium

Genome
Schizosaccharomyces_japonicus.GCA_000149845.2.39.gtf Download

Annotations for Schizosaccharomyces japonicus from Ensembl

Schizosaccharomyces_japonicus.GCA_000149845.2.dna.toplevel.genome.fa Download

Reference genome sequence for Schizosaccharomyces japonicus from Ensembl

Schizosaccharomyces pombe

File NameDownload LinkDescription
Spom1.ctss Download

Raw TSS data obtained from Schizosaccharomyces pombe grown in YPD medium replicate 1

Spom2.ctss Download

Raw TSS data obtained from Schizosaccharomyces pombe grown in YPD medium replicate 2

SpomconsensusClusters.txt Download

Core promoter data obtained from Schizosaccharomyces pombe grown in YPD medium

Genome_0725
Schizosaccharomyces_pombe.ASM294v2.31_updated_chr_names.gff3 Download

Annotations for Schizosaccharomyces pombe from Pombase

Schizosaccharomyces_pombe_all_chromosomes_updated_chr_names.fa Download

Reference genome sequence for Schizosaccharomyces pombe from Pombase

other_track
GSE110976
GSE110976_EMM_exp.bw Download

TSS data obtained from Schizosaccharomyces pombe grown in 30C Edinburgh Minimal Media (EMM2) condition

GSE110976_EMM_nitro.bw Download

TSS data obtained from Schizosaccharomyces pombe grown in no nitrogen (16hours) 30C EMM2 condition

GSE110976_YES_H2O2.bw Download

TSS data obtained from Schizosaccharomyces pombe grown in 30C Yeast Extract (YES) condition

GSE110976_YES_exp.bw Download

TSS data obtained from Schizosaccharomyces pombe grown in 0.5mM H2O2 30C YES condition

GSE110976_YES_heat.bw Download

TSS data obtained from Schizosaccharomyces pombe grown in 39C (15min) YES condition

Nucleosome_Occupancy
Lantermann_2010_PMID_20118936.bw Download

Transcription factor binding sites data from Wood 2012

Transcription_Factor_Binding_Sites
README.txt Download

Wood_2012_PMID_22039153.bed Download

Wood_2012_PMID_22039153_test.bed Download

Yarrowia lipolytica

File NameDownload LinkDescription
Ylip1.ctss Download

Raw TSS data obtained from Yarrowia lipolytica grown in YPD medium replicate 1

Ylip2.ctss Download

Raw TSS data obtained from Yarrowia lipolytica grown in YPD medium replicate 2

YlipconsensusClusters.txt Download

Core promoter data obtained from Yarrowia lipolytica grown in YPD medium

Genome
GCF_000002525.2_ASM252v1_genomic.gff Download

Annotations for Yarrowia lipolytica from NCBI

Ylipolytica_GCF_000002525.2_ASM252v1_genomic.fna Download

Reference genome sequence for Yarrowia lipolytica from NCBI